SOM cluster: 329

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 337
Promoter: 9%
CpG-Island: 0%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 57/100 | e-val: 0
Factore-val(match)DB
SPI10.0000000099917JASPAR
SPIB0.00000021284JASPAR
FEV0.000032035JASPAR
ELF50.00019611JASPAR
GABPA0.00040717JASPAR
Sites: 29/100 | e-val: 4.1e-16
Factore-val(match)DB
EWSR1-FLI10.00000011937JASPAR
Pax40.00000013432JASPAR
SP10.0000015499JASPAR
RREB10.000022222JASPAR
PLAG10.000034525JASPAR

BED file downloads

Download top of 337 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 66642240-66642390CKLF-CMTM139.99
chr16: 66642240-66642390CKLF39.99
chr19: 50019240-50019390SNORD3340.96
chr19: 50019240-50019390PRRG240.96
chrX: 53469300-53469450HUWE146.42
chr11: 65378540-65378690SCYL147.04
chr8: 130900360-130900510FAM49B58.28
chr8: 130900360-130900510RP11-473O4.558.28
chr15: 90578265-90578415RP11-493E3.260
chr6: 41239800-41239950TREM160.09
View top connections.

Other

CodePlot