SOM cluster: 320

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1312
Promoter: 1%
CpG-Island: 0%
Conserved: 10%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 7/100 | e-val: 0.000000000024
Factore-val(match)DB
NKX3-10.00000038169JASPAR
ZNF354C0.000063018JASPAR
HNF1A0.00013889JASPAR
SPI10.003495JASPAR
NFATC20.0041519JASPAR
Sites: 7/100 | e-val: 0.000000000076
Factore-val(match)DB
NKX3-10.000084863JASPAR
HNF1A0.00030392JASPAR
Nkx2-50.00034931JASPAR
NFATC20.0005931JASPAR
BRCA10.00066117JASPAR
Sites: 15/100 | e-val: 0.00000032
Factore-val(match)DB
znf1430.0000047246JASPAR
NKX3-10.0036589JASPAR
Pax60.0075504JASPAR
HNF1B0.016727JASPAR
NFATC20.021686JASPAR
Sites: 6/100 | e-val: 0.000055
Factore-val(match)DB
Spz10.00000027472JASPAR
ZNF354C0.000049687JASPAR
SOX90.00017951JASPAR
PPARG0.00049467JASPAR
Sox20.00062238JASPAR
Sites: 7/100 | e-val: 0.0016
Factore-val(match)DB
FOXO30.0007752JASPAR
FOXD10.0015665JASPAR
RUNX10.007658JASPAR
PPARG0.0083207JASPAR
Spz10.0096168JASPAR

BED file downloads

Download top of 1312 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 92566720-92566870BTG136.6
chr4: 89201700-89201850RNU6-818P40.69
chr4: 89201700-89201850PPM1K40.69
chr17: 73291700-73291850AC011933.141.18
chr17: 73291700-73291850SLC25A1941.18
chr17: 73291700-73291850GRB241.18
chr3: 174991960-174992110NAALADL2-AS241.43
chr8: 38820620-38820770PLEKHA243.02
chr8: 38820620-38820770CTD-2544N14.343.02
chr8: 38820620-38820770ADAM943.02
View top connections.

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