SOM cluster: 302

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 132
Promoter: 6%
CpG-Island: 2%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 31/100 | e-val: 0.0000000000041
Factore-val(match)DB
SP10.0000000010301JASPAR
Pax40.000011285JASPAR
RREB10.000018802JASPAR
EWSR1-FLI10.000064341JASPAR
Klf40.00012964JASPAR
Sites: 20/100 | e-val: 0.00066
Factore-val(match)DB
Myf0.000052152JASPAR
RXR::RAR_DR50.00012161JASPAR
SP10.00061325JASPAR
MZF1_1-40.017646JASPAR
Stat30.04391JASPAR

BED file downloads

Download top of 132 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 129513665-129513815TMCC139.88
chr17: 7493360-7493510SOX1558.72
chr17: 7493360-7493510EIF4A158.72
chr17: 7493360-7493510TNFSF1258.72
chr12: 25288500-25288650KRAS63.92
chr20: 50722640-50722790ZFP6466.22
chr9: 27395700-27395850MOB3B68.26
chr12: 10513800-10513950RP11-277P12.2078.27
chr9: 112080600-112080750EPB41L4B79.19
chr9: 112080600-112080750PTPN379.19
View top connections.

Other

CodePlot