SOM cluster: 261

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 121
Promoter: 5%
CpG-Island: 3%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 42/100 | e-val: 0.0000000078
Factore-val(match)DB
EWSR1-FLI10.00000011086JASPAR
FEV0.00000041955JASPAR
SPI10.0000018093JASPAR
Stat30.000013901JASPAR
SPIB0.000078243JASPAR
Sites: 15/100 | e-val: 0.35
Factore-val(match)DB
SP10.00000000025696JASPAR
Pax40.000000083026JASPAR
RREB10.00000032792JASPAR
EWSR1-FLI10.000010573JASPAR
Klf40.0015135JASPAR
Sites: 23/100 | e-val: 0.19
Factore-val(match)DB
SOX90.000000053838JASPAR
SOX100.00000019301JASPAR
Sox20.00000019384JASPAR
SRY0.000015542JASPAR
Pou5f10.000082388JASPAR

BED file downloads

Download top of 121 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 99159500-99159650FARP1-AS143.87
chr17: 15869840-15869990TTC1952.35
chr3: 177062940-177063090LINC0050161.75
chr12: 32607920-32608070FGD464.36
chr3: 23907600-23907750UBE2E170.17
chr12: 110384400-110384550RP1-7G5.670.73
chr12: 110384400-110384550TCHP70.73
chr3: 30708760-30708910AC096921.272.22
chr22: 28246280-28246430PITPNB74.65
chr12: 89739640-89739790DUSP676.08
View top connections.

Other

CodePlot