SOM cluster: 260

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 197
Promoter: 7%
CpG-Island: 1%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 3.4e-40
Factore-val(match)DB
CTCF0JASPAR
INSM10.00000073884JASPAR
SP10.00011532JASPAR
MYC::MAX0.0043795JASPAR
PPARG::RXRA0.013928JASPAR

BED file downloads

Download top of 197 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151137620-151137770TMOD427.3
chr9: 110184480-110184630RAD23B36.11
chr9: 110184480-110184630KLF436.11
chr13: 23733485-23733635LINC0036244.4
chr9: 115517060-115517210SNX3048.08
chr4: 40631520-40631670RBM4751.75
chr3: 159304440-159304590IQCJ-SCHIP154.16
chr6: 52984980-52985130RN7SL244P56.05
chr6: 52984980-52985130GCM156.05
chr2: 166555180-166555330CSRNP360.86
View top connections.

Other

CodePlot