SOM cluster: 252

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 96
Promoter: 41%
CpG-Island: 69%
Conserved: 76%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/96 | e-val: 0
Factore-val(match)DB
SP10.000049777JASPAR
Klf40.0027654JASPAR
Egr10.011715JASPAR
TFAP2A0.017712JASPAR
CTCF0.038364JASPAR
Sites: 66/96 | e-val: 5.2e-25
Factore-val(match)DB
SP10.000000000030947JASPAR
Pax40.00014937JASPAR
RREB10.00043259JASPAR
PLAG10.00048717JASPAR
TFAP2A0.0012049JASPAR

BED file downloads

Download top of 96 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 13275260-13275410NACC150.86
chr7: 106685285-106685435PRKAR2B54.86
chr5: 170288745-170288895GABRP59.42
chr5: 170288745-170288895RANBP1759.42
chr11: 123525480-123525630ZNF20260.29
chr11: 123525480-123525630SCN3B60.29
chr11: 104034960-104035110PDGFD61.07
chr3: 14257820-14257970XPC61.84
chr19: 17817640-17817790UNC13A64.59
chr1: 210424660-210424810SERTAD4-AS166.38
View top connections.

Other

CodePlot