SOM cluster: 2489

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 108
Promoter: 12%
CpG-Island: 5%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 9.7e-22
Factore-val(match)DB
AP10.000000000020593JASPAR
NFE2L20.0000000036182JASPAR
PPARG0.0038896JASPAR
NFE2L1::MafG0.0047794JASPAR
Foxa20.008119JASPAR
Sites: 20/100 | e-val: 0.1
Factore-val(match)DB
Myf0.00000082189JASPAR
REST0.000076121JASPAR
Klf40.00059004JASPAR
Pax40.0010956JASPAR
RREB10.0037635JASPAR

BED file downloads

Download top of 108 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr20: 60735040-60735190OSBPL254.21
chr8: 131054340-131054490FAM49B54.45
chr2: 85173780-85173930KCMF154.73
chr2: 85173780-85173930AC022210.254.73
chr6: 28047800-28047950RP1-265C24.556.77
chr6: 28047800-28047950ZNF16556.77
chr6: 28047800-28047950U356.77
chr17: 7338900-7339050POLR2A66.5
chr17: 7338900-7339050FGF1166.5
chr17: 7338900-7339050TMEM10266.5
View top connections.

Other

CodePlot