SOM cluster: 2483

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1135
Promoter: 1%
CpG-Island: 1%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 14/100 | e-val: 0.059
Factore-val(match)DB
HNF4A0.000067287JASPAR
PPARG::RXRA0.00072956JASPAR
TLX1::NFIC0.0032711JASPAR
NR2F10.010431JASPAR
Stat30.020663JASPAR
Sites: 26/100 | e-val: 1.8
Factore-val(match)DB
FOXA10.000000000000017208JASPAR
Foxa20.000000000000020761JASPAR
FOXI10.00000012944JASPAR
FOXF20.00000017903JASPAR
Foxd30.00000026129JASPAR

BED file downloads

Download top of 1135 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 49448980-49449130WNT10B48.33
chr19: 54979040-54979190LENG948.68
chr3: 128038800-128038950EEFSEC49.54
chr3: 53875400-53875550CHDH52.73
chr21: 42878525-42878675TMPRSS253.88
chr22: 24990260-24990410FAM211B54.18
chr3: 16278720-16278870DPH358.68
chr11: 75188140-75188290KLHL3559.85
chr6: 3244580-3244730TUBB2BP162.51
chr6: 3244580-3244730BPHL62.51
View top connections.

Other

CodePlot