SOM cluster: 2468

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 9461
Promoter: 0%
CpG-Island: 0%
Conserved: 14%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 24/100 | e-val: 0.021
Factore-val(match)DB
Foxa20.000092249JASPAR
Lhx30.00017808JASPAR
Foxd30.00055952JASPAR
MEF2A0.00061574JASPAR
Foxq10.00063535JASPAR

BED file downloads

Download top of 9461 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 100692560-100692710ZIC234.94
chr8: 76480320-76480470HNF4G38.11
chr11: 15895100-15895250SOX638.65
chr1: 90446305-90446455GEMIN8P440.34
chr2: 30675900-30676050LCLAT141.68
chr3: 153906740-153906890DHX3643.2
chr1: 165341200-165341350LMX1A43.93
chr12: 8022025-8022175NANOGNB44.24
chr3: 122769620-122769770SEMA5B44.6
chr8: 81659360-81659510HMGB1P4146.79
View top connections.

Other

CodePlot