SOM cluster: 2460

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 337
Promoter: 2%
CpG-Island: 0%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 3.8e-30
Factore-val(match)DB
HNF1B0JASPAR
HNF1A0.0000000000000073275JASPAR
Lhx30.00000035368JASPAR
Prrx20.000060329JASPAR
NKX3-10.00041709JASPAR

BED file downloads

Download top of 337 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 30366200-30366350U347.95
chr10: 27523260-27523410ACBD550.3
chr11: 63771820-63771970OTUB152.47
chr17: 68071260-68071410KCNJ1653.48
chr12: 86230320-86230470RASSF954.55
chr8: 8188000-8188150SGK22355.31
chr8: 98798360-98798510LAPTM4B57.55
chr3: 177017760-177017910LINC0050159.54
chr4: 88896080-88896230SPP160.79
chr1: 165614900-165615050MGST363.88
View top connections.

Other

CodePlot