SOM cluster: 2423

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 235
Promoter: 5%
CpG-Island: 1%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 79/100 | e-val: 4.2e-22
Factore-val(match)DB
Lhx30.000061266JASPAR
HNF1A0.00042395JASPAR
ARID3A0.001165JASPAR
MEF2A0.0020033JASPAR
Prrx20.0023179JASPAR

BED file downloads

Download top of 235 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 77585680-77585830ZFHX454.22
chr8: 77585680-77585830ZFHX4-AS154.22
chr2: 66671880-66672030AC092669.156.32
chr1: 246755880-246756030RP11-690C23.461.88
chr8: 37374645-37374795RP11-150O12.263.33
chr8: 37374645-37374795RP11-150O12.663.33
chr2: 17720860-17721010VSNL168.77
chr7: 116228820-116228970CAV169.4
chr7: 116228820-116228970CAV269.4
chr5: 67548380-67548530PIK3R170.22
View top connections.

Other

CodePlot