SOM cluster: 2392

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 176
Promoter: 5%
CpG-Island: 1%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0019
Factore-val(match)DB
FOXI10.0000013996JASPAR
Foxd30.000001513JASPAR
FOXF20.00002362JASPAR
Foxq10.000046033JASPAR
FOXA10.000085133JASPAR

BED file downloads

Download top of 176 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr14: 24109880-24110030AP1G255.58
chr5: 430020-430170AHRR57.27
chr5: 430020-430170SLC9A357.27
chr8: 38592005-38592155RP11-723D22.257.74
chr4: 8262620-8262770HTRA364.18
chr4: 8262620-8262770SH3TC164.18
chr17: 58185285-58185575HEATR664.93
chr20: 52531140-52531290BCAS166.43
chr12: 57997680-57997830ARHGEF2567.2
chr12: 57997680-57997830SLC26A1067.2
View top connections.

Other

CodePlot