SOM cluster: 239

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 193
Promoter: 2%
CpG-Island: 0%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
CTCF2.2204e-16JASPAR
INSM10.00000048148JASPAR
SP10.0016606JASPAR
MYC::MAX0.0051249JASPAR
Zfp4230.0079636JASPAR
Sites: 33/100 | e-val: 0.000055
Factore-val(match)DB
SP10.0000052291JASPAR
Klf40.000076194JASPAR
Tal1::Gata10.00078121JASPAR
RREB10.00080335JASPAR
Myf0.0071976JASPAR

BED file downloads

Download top of 193 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 203296980-203297130FMOD42.09
chr19: 13323760-13323910TRMT149.83
chr19: 13323760-13323910IER249.83
chr12: 49437640-49437790RP11-386G11.358.45
chr3: 51753300-51753450RAD54L259.53
chr22: 37418105-37418255CSF2RB60.17
chr1: 24243340-24243490CNR260.76
chr1: 24243340-24243490RP11-4M23.260.76
chr1: 24243340-24243490SRSF1060.76
chr19: 41108120-41108270SHKBP161.01
View top connections.

Other

CodePlot