SOM cluster: 2384

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 232
Promoter: 2%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 8.1e-24
Factore-val(match)DB
Foxd30.00042404JASPAR
MEF2A0.00048581JASPAR
FOXI10.0034784JASPAR
NFIL30.0047031JASPAR
NKX3-10.0060874JASPAR
Sites: 31/100 | e-val: 0.018
Factore-val(match)DB
FOXD10.00000010757JASPAR
FOXO30.00000012311JASPAR
HNF1B0.0000015933JASPAR
Foxq10.000067902JASPAR
Foxa20.000068765JASPAR

BED file downloads

Download top of 232 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 6835440-6835590ARHGAP2851.98
chr4: 184362560-184362710RP11-367N14.254.17
chr13: 32502260-32502410FRY-AS154.89
chr3: 167696060-167696210HMGN2P2660.98
chr4: 110532300-110532450CCDC109B66.44
chr3: 67757400-67757550RP11-81N13.171.44
chr12: 54445965-54446115HOXC880.91
chr12: 54445965-54446115HOXC1080.91
chr12: 54445965-54446115HOXC480.91
chr3: 73609040-73609190PDZRN380.98
View top connections.

Other

CodePlot