SOM cluster: 2384
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 232Promoter: 2%
CpG-Island: 0%
Conserved: 40%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 58/100 | e-val: 8.1e-24 | ||
---|---|---|
Factor | e-val(match) | DB |
Foxd3 | 0.00042404 | JASPAR |
MEF2A | 0.00048581 | JASPAR |
FOXI1 | 0.0034784 | JASPAR |
NFIL3 | 0.0047031 | JASPAR |
NKX3-1 | 0.0060874 | JASPAR |
Sites: 31/100 | e-val: 0.018 | ||
Factor | e-val(match) | DB |
FOXD1 | 0.00000010757 | JASPAR |
FOXO3 | 0.00000012311 | JASPAR |
HNF1B | 0.0000015933 | JASPAR |
Foxq1 | 0.000067902 | JASPAR |
Foxa2 | 0.000068765 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr18: 6835440-6835590 | ARHGAP28 | 51.98 |
chr4: 184362560-184362710 | RP11-367N14.2 | 54.17 |
chr13: 32502260-32502410 | FRY-AS1 | 54.89 |
chr3: 167696060-167696210 | HMGN2P26 | 60.98 |
chr4: 110532300-110532450 | CCDC109B | 66.44 |
chr3: 67757400-67757550 | RP11-81N13.1 | 71.44 |
chr12: 54445965-54446115 | HOXC10 | 80.91 |
chr12: 54445965-54446115 | HOXC4 | 80.91 |
chr12: 54445965-54446115 | HOXC8 | 80.91 |
chr3: 73609040-73609190 | PDZRN3 | 80.98 |