SOM cluster: 2369

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 198
Promoter: 1%
CpG-Island: 0%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 0
Factore-val(match)DB
FEV0.00000000000070244JASPAR
ELK40.000000034508JASPAR
SPI10.00000013597JASPAR
ELF50.00000032594JASPAR
SPIB0.0000012339JASPAR
Sites: 15/100 | e-val: 0.00015
Factore-val(match)DB
TLX1::NFIC0.000000012903JASPAR
NFATC20.0000052048JASPAR
NFIC0.0008787JASPAR
Pax40.0038146JASPAR
Hand1::Tcfe2a0.0087476JASPAR

BED file downloads

Download top of 198 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 95839200-95839350CTD-2536I1.134.09
chr3: 168950900-168951050MECOM42.48
chr1: 156137460-156137610RAB2546.2
chr1: 156137460-156137610SEMA4A46.2
chr5: 89814600-89814750LYSMD351.46
chr8: 131464240-131464390ASAP161.11
chr8: 54531180-54531330ATP6V1H61.15
chr7: 35832220-35832370HERPUD269.43
chr13: 21974040-21974190RNA5SP2575.57
chr1: 214576040-214576190PTPN1477.67
View top connections.

Other

CodePlot