SOM cluster: 2325

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 400
Promoter: 0%
CpG-Island: 0%
Conserved: 94%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
CTCF0.00000000000007061JASPAR
TAL1::TCF30.0034124JASPAR
TLX1::NFIC0.0046118JASPAR
Zfp4230.0082787JASPAR
T0.0087983JASPAR
Sites: 98/100 | e-val: 0
Factore-val(match)DB
Lhx30.00087703JASPAR
Foxq10.0037313JASPAR
Foxd30.0040205JASPAR
HNF1A0.0053594JASPAR
MEF2A0.014564JASPAR
Sites: 83/100 | e-val: 0.00000000000028
Factore-val(match)DB
Foxd30.0019823JASPAR
Foxq10.0022919JASPAR
MEF2A0.003228JASPAR
ARID3A0.006082JASPAR
Lhx30.0071135JASPAR

BED file downloads

Download top of 400 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 78596580-78596730RP11-183M13.126.47
chr1: 89073920-89074070PKN233.59
chr12: 85236260-85236410SLC6A1546.99
chr12: 85236260-85236410RP11-1079J22.146.99
chr8: 110732600-110732750RP11-422N16.350.57
chr8: 110732600-110732750SYBU50.57
chr7: 115995500-115995650CAV251.99
chr1: 162246400-162246550NOS1AP55.82
chr11: 15792460-15792610RP11-396O20.256.13
chr3: 173089800-173089950NLGN156.64
View top connections.

Other

CodePlot