SOM cluster: 229

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 89
Promoter: 26%
CpG-Island: 17%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/89 | e-val: 0
Factore-val(match)DB
SP10.0000000076081JASPAR
Pax40.0000069753JASPAR
EWSR1-FLI10.00020638JASPAR
RREB10.0014656JASPAR
PLAG10.0026237JASPAR
Sites: 29/89 | e-val: 0.042
Factore-val(match)DB
SP10.0000000000044658JASPAR
MZF1_1-40.000095222JASPAR
Klf40.00014527JASPAR
Pax40.00080631JASPAR
RREB10.0027459JASPAR

BED file downloads

Download top of 89 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151032740-151032890MLLT1112.8
chr22: 38430320-38430470RP5-1039K5.1670.27
chr22: 38430320-38430470MICALL170.27
chr1: 182558280-182558430RNASEL74.12
chr11: 73372400-73372550RAB6A75.93
chr11: 73372400-73372550HMGN2P3875.93
chr9: 131487385-131487535VTI1BP479.14
chr6: 28979180-28979330KRT18P183.95
chr6: 28979180-28979330OR2J183.95
chr16: 31463100-31463250ITGAX90.91
View top connections.

Other

CodePlot