SOM cluster: 2273

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1048
Promoter: 0%
CpG-Island: 0%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.3
Factore-val(match)DB
EWSR1-FLI10.0000000064626JASPAR
IRF10.0031569JASPAR
SPI10.0042334JASPAR
SOX100.0068942JASPAR
NFATC20.011783JASPAR

BED file downloads

Download top of 1048 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 93945040-93945190MRPL4258.06
chr12: 93945040-93945190RN7SL737P58.06
chr7: 39963900-39964050AC004987.959.21
chr2: 70531605-70531755TIA161.93
chr2: 70531605-70531755AC022201.561.93
chr5: 118218540-118218690CTC-448D22.163.54
chr17: 46270080-46270230CBX163.61
chr3: 139149400-139149550ACTG1P165.48
chr8: 70891700-70891850PRDM1467.68
chr1: 242387840-242387990RN7SKP1267.69
View top connections.

Other

CodePlot