SOM cluster: 2272

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 470
Promoter: 0%
CpG-Island: 1%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 2.6e-18
Factore-val(match)DB
Lhx30.0000039167JASPAR
HNF1A0.0013813JASPAR
Prrx20.0015437JASPAR
Nkx2-50.0054224JASPAR
IRF20.005474JASPAR
Sites: 58/100 | e-val: 1e-30
Factore-val(match)DB
FEV0.00000000000080602JASPAR
ELK40.000000018268JASPAR
SPI10.00000020123JASPAR
ELF50.0000004354JASPAR
SPIB0.0000031913JASPAR

BED file downloads

Download top of 470 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 198861740-198861890MIR181A1HG40.14
chr1: 198861740-198861890MIR181B140.14
chr8: 128812360-128812510PVT146.64
chr8: 81747840-81747990ZNF70450.57
chr8: 81747840-81747990RN7SL308P50.57
chr8: 81747840-81747990HMGB1P4150.57
chr12: 112787400-112787550HECTD451.24
chr4: 101439440-101439590EMCN51.31
chr4: 153128280-153128430RP11-18H21.354.7
chr11: 122934720-122934870SNORD14C55.78
View top connections.

Other

CodePlot