SOM cluster: 2271

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 305
Promoter: 4%
CpG-Island: 0%
Conserved: 63%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 0
Factore-val(match)DB
TAL1::TCF30.000065853JASPAR
ARID3A0.000076896JASPAR
Prrx20.00012131JASPAR
HNF1A0.00038211JASPAR
Lhx30.00047921JASPAR

BED file downloads

Download top of 305 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 10589280-10589430AP1M253.7
chr19: 10589280-10589430PDE4A53.7
chr5: 174270960-174271110NIFKP259.46
chr8: 120591460-120591610RP11-99I9.261.86
chr8: 120591460-120591610ENPP261.86
chr3: 151697800-151697950RP11-454C18.265.63
chr2: 202746180-202746330CDK1570.5
chr1: 10785000-10785150CASZ170.75
chr8: 97596440-97596590SDC272.56
chr5: 52864820-52864970FST73.92
View top connections.

Other

CodePlot