SOM cluster: 2250

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 305
Promoter: 0%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0
Factore-val(match)DB
RXRA::VDR0.00010858JASPAR
Tcfcp2l10.008588JASPAR
HNF1B0.024832JASPAR
Lhx30.046375JASPAR
RORA_10.049668JASPAR

BED file downloads

Download top of 305 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 102450720-102450870GRHL257.74
chr3: 168595780-168595930RPL21P4359.03
chr4: 41336340-41336490UCHL161.64
chr11: 121128800-121128950TECTA63.3
chr1: 117217500-117217650IGSF363.6
chrX: 117907880-117908030DOCK1165.87
chr1: 157102520-157102670KRT8P4567.07
chr6: 53611400-53611550LRRC167.37
chr3: 161033840-161033990PSMC1P768.86
chr3: 161033840-161033990SPTSSB68.86
View top connections.

Other

CodePlot