SOM cluster: 2235

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 188
Promoter: 2%
CpG-Island: 0%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.7e-21
Factore-val(match)DB
FOXA10.00000000000091249JASPAR
Foxa20.0000000000041408JASPAR
Foxd30.00000000018585JASPAR
FOXF20.0000000079258JASPAR
Foxq10.000000095302JASPAR

BED file downloads

Download top of 188 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 152968500-152968650SLC6A839.67
chrX: 152968500-152968650SRPK339.67
chr3: 136062440-136062590STAG146.49
chr3: 64252440-64252590PRICKLE260.87
chr15: 93181540-93181690FAM174B62.98
chr2: 70262100-70262250PCBP165.62
chr8: 125192700-125192850FER1L6-AS267.7
chr8: 125192700-125192850FER1L667.7
chr5: 149980-150130LRRC14B70.54
chr10: 126105400-126105550LHPP71.29
View top connections.

Other

CodePlot