SOM cluster: 2234

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 217
Promoter: 6%
CpG-Island: 1%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.077
Factore-val(match)DB
T0.00000029133JASPAR
Klf40.000035023JASPAR
ESR10.00057753JASPAR
INSM10.0095187JASPAR
Egr10.011327JASPAR
Sites: 11/100 | e-val: 0.0037
Factore-val(match)DB
NR1H2::RXRA0.012424JASPAR
PPARG::RXRA0.018103JASPAR
MYC::MAX0.022695JASPAR
FEV0.040114JASPAR
HIF1A::ARNT0.040282JASPAR
Sites: 24/100 | e-val: 0.72
Factore-val(match)DB
SP10.00000015635JASPAR
MZF1_5-130.00056936JASPAR
Tal1::Gata10.00098888JASPAR
Pax40.0014513JASPAR
MZF1_1-40.0080293JASPAR

BED file downloads

Download top of 217 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 73553545-73553695CASKIN246.53
chr17: 59413480-59413630BCAS349.97
chr8: 39912420-39912570C8orf454.62
chr11: 67890620-67890770CTD-2655K5.156.03
chr17: 73553700-73553850KIAA019557.02
chr3: 193793720-193793870RP11-135A1.257.18
chr14: 35825460-35825610KIAA039157.38
chr14: 35825460-35825610RP11-561B11.357.38
chr14: 35825460-35825610KIAA039157.38
chr17: 71284840-71284990CDC42EP458.74
View top connections.

Other

CodePlot