SOM cluster: 2228

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 320
Promoter: 2%
CpG-Island: 0%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 8e-30
Factore-val(match)DB
FOXA10.00000000031292JASPAR
Foxd30.00000000069377JASPAR
Foxa20.0000000021496JASPAR
Foxq10.000000015312JASPAR
FOXI10.0000016321JASPAR

BED file downloads

Download top of 320 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 47064160-47064310CCDC1233.98
chr12: 106155160-106155310CASC1844.17
chr1: 61598820-61598970NFIA49.24
chr7: 140150280-140150430DENND2A49.26
chr1: 209975900-209976050IRF654.12
chr11: 60602720-60602870RP11-881M11.155.52
chr11: 60602720-60602870TMEM132A55.52
chr7: 56147480-56147630CHCHD256.55
chr7: 56147480-56147630GBAS56.55
chr10: 104914820-104914970RP11-332O19.258.28
View top connections.

Other

CodePlot