SOM cluster: 2206

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4948
Promoter: 1%
CpG-Island: 0%
Conserved: 26%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 24/100 | e-val: 0.066
Factore-val(match)DB
ARID3A0.00021345JASPAR
Sox20.00085017JASPAR
HNF1A0.00093448JASPAR
Pou5f10.00099699JASPAR
MEF2A0.0015509JASPAR

BED file downloads

Download top of 4948 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 161877180-161877330RP11-456P18.230.98
chr12: 93949540-93949690SOCS2-AS133.59
chr2: 111892920-111893070BCL2L1137.73
chr2: 109258545-109258695AC010095.538.61
chr2: 109258545-109258695AC010095.738.61
chr12: 89743140-89743290POC1B39.25
chr12: 89743140-89743290DUSP639.25
chr12: 27719680-27719830PPFIBP139.55
chr12: 27719680-27719830RP11-709A23.239.55
chr8: 19585760-19585910RP11-1105O14.139.69
View top connections.

Other

CodePlot