SOM cluster: 2205

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 368
Promoter: 5%
CpG-Island: 1%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.000000059
Factore-val(match)DB
SOX100.0000024611JASPAR
SOX90.000047523JASPAR
Sox20.0016395JASPAR
NR4A20.0021238JASPAR
PPARG::RXRA0.0033637JASPAR
Sites: 11/100 | e-val: 0.00056
Factore-val(match)DB
Foxd30.000067JASPAR
IRF10.0010351JASPAR
FOXA10.0013855JASPAR
Foxq10.014321JASPAR
MEF2A0.014614JASPAR
Sites: 19/100 | e-val: 2
Factore-val(match)DB
SOX100.000029128JASPAR
Nr2e30.0003945JASPAR
SOX90.0026372JASPAR
Foxd30.0066525JASPAR
SPI10.0092577JASPAR

BED file downloads

Download top of 368 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 203315640-203315790BTG226.09
chr9: 116766545-116766695AMBP32.02
chr4: 154170945-154171095TRIM249.26
chr3: 37742380-37742530ITGA952.8
chr3: 37742380-37742530AC093415.252.8
chr6: 10375740-10375890LINC0051853.35
chr6: 10375740-10375890TFAP2A-AS153.35
chr6: 10375740-10375890TFAP2A53.35
chr12: 120658745-120658895GCN1L153.81
chr1: 111005720-111005870PROK155.53
View top connections.

Other

CodePlot