SOM cluster: 218

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1626
Promoter: 13%
CpG-Island: 5%
Conserved: 26%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 2.1e-28
Factore-val(match)DB
Pax40.0000000062597JASPAR
RREB10.00000001902JASPAR
SP10.00000059015JASPAR
PLAG10.00015375JASPAR
Klf40.0003887JASPAR
Sites: 26/100 | e-val: 0.000032
Factore-val(match)DB
EWSR1-FLI10.0000012485JASPAR
FEV0.0010685JASPAR
INSM10.0052206JASPAR
SPI10.0054551JASPAR
MZF1_1-40.0076718JASPAR
Sites: 35/100 | e-val: 1.4
Factore-val(match)DB
TFAP2A0.000065398JASPAR
TP530.00049096JASPAR
EBF10.00051463JASPAR
PLAG10.0068631JASPAR
SP10.010846JASPAR
Sites: 26/100 | e-val: 1.2
Factore-val(match)DB
PLAG10.0000016047JASPAR
EBF10.00006733JASPAR
Zfp4230.00010987JASPAR
NFKB10.00014483JASPAR
CTCF0.00080814JASPAR
Sites: 32/100 | e-val: 0.015
Factore-val(match)DB
PLAG10.00000049457JASPAR
PPARG::RXRA0.0010845JASPAR
NFE2L20.0040007JASPAR
SP10.007944JASPAR
SPIB0.0088431JASPAR

BED file downloads

Download top of 1626 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 32158745-32158895AGER45.38
chr22: 37258960-37259110NCF447.09
chr22: 37258960-37259110CSF2RB47.09
chr1: 212856520-212856670BATF347.7
chr13: 99506300-99506450RPL7L1P1249.16
chr9: 36994360-36994510PAX549.68
chr9: 36994360-36994510RP11-220I1.149.68
chr9: 36994360-36994510RP11-297B17.349.68
chr1: 161039180-161039330USF150.07
chr1: 161039180-161039330ARHGAP3050.07
View top connections.

Other

CodePlot