SOM cluster: 2175

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 6766
Promoter: 2%
CpG-Island: 0%
Conserved: 13%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.46
Factore-val(match)DB
Foxq10.00015529JASPAR
Lhx30.0011391JASPAR
Nkx2-50.0013047JASPAR
FOXO30.0033868JASPAR
SRY0.0051923JASPAR

BED file downloads

Download top of 6766 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150904400-150904550PRUNE13.27
chr1: 150904400-150904550CERS213.27
chr1: 150640685-150640835HORMAD118.01
chr3: 37298040-37298190AC097359.229.23
chr12: 6434525-6434675Y_RNA29.75
chr9: 132249525-132249675LINC0096336.22
chr7: 107930660-107930810NRCAM39.22
chr12: 133634700-133634850ZNF2642.2
chr12: 104683345-104683495RP11-818F20.542.27
chr2: 26174305-26174455RAB1044.44
View top connections.

Other

CodePlot