SOM cluster: 2146

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2091
Promoter: 0%
CpG-Island: 0%
Conserved: 15%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 5.2e-31
Factore-val(match)DB
Lhx30.000012716JASPAR
AP10.00012701JASPAR
NFE2L20.00028782JASPAR
Foxq10.00085053JASPAR
ARID3A0.0041884JASPAR
Sites: 23/100 | e-val: 0.55
Factore-val(match)DB
HNF1B0.00000024605JASPAR
HNF1A0.0000034742JASPAR
ARID3A0.000021119JASPAR
Pax40.000075105JASPAR
Lhx30.00011455JASPAR

BED file downloads

Download top of 2091 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 6758680-6758830DEFB126.47
chr6: 40387125-40387275RP11-552E20.449.33
chr1: 192831520-192831670LINC0103251.29
chr19: 35589685-35589835FXYD352.53
chr1: 46543480-46543630TSPAN152.92
chr8: 134247300-134247450NDRG154.94
chr1: 89830900-89831050GBP655.03
chr19: 45950980-45951130ERCC258.41
chr20: 60816820-60816970OSBPL259.35
chr1: 209948920-209949070IRF661.6
View top connections.

Other

CodePlot