SOM cluster: 2139

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 704
Promoter: 6%
CpG-Island: 5%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.0000022
Factore-val(match)DB
EWSR1-FLI10.000054718JASPAR
SP10.00032447JASPAR
MZF1_5-130.00046451JASPAR
PLAG10.0025365JASPAR
znf1430.003395JASPAR

BED file downloads

Download top of 704 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 96880480-96880630NR2F235.24
chr17: 59480145-59480295C17orf8242.23
chr8: 104022900-104023050KB-1639H6.244.79
chr8: 128805260-128805410PVT146.32
chr3: 64007720-64007870PSMD652.91
chr16: 2093465-2093615MIR122553.67
chr1: 115052720-115052870RP4-591B8.253.81
chr20: 49307180-49307330FAM65C55.89
chr5: 176250385-176250535HK357.69
chr17: 73483065-73483215TSEN5458.12
View top connections.

Other

CodePlot