SOM cluster: 2112

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 279
Promoter: 3%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.000000062
Factore-val(match)DB
SPI10.00000042395JASPAR
ELF50.000024074JASPAR
FEV0.000064425JASPAR
MYC::MAX0.00046542JASPAR
GABPA0.00049639JASPAR
Sites: 23/100 | e-val: 0.13
Factore-val(match)DB
SOX100.00072248JASPAR
Sox20.0011494JASPAR
Foxd30.0017153JASPAR
Pou5f10.0042099JASPAR
IRF20.0056937JASPAR

BED file downloads

Download top of 279 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156143080-156143230SMG544.96
chr1: 156143080-156143230SLC25A4444.96
chr9: 115990460-115990610PRPF452.35
chr2: 65253105-65253255SLC1A460.22
chr8: 104369380-104369530SLC25A3263.6
chrX: 129074820-129074970UTP14A64.85
chr2: 61592480-61592630USP3464.9
chr1: 166050300-166050450FAM78B71.64
chr13: 52761905-52762055MRPS31P573.38
chr13: 52761905-52762055NEK373.38
View top connections.

Other

CodePlot