SOM cluster: 2108

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 238
Promoter: 2%
CpG-Island: 0%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.0000022
Factore-val(match)DB
NFATC20.00017813JASPAR
IRF10.00091155JASPAR
FOXA10.0019271JASPAR
Foxa20.0022954JASPAR
IRF20.0058413JASPAR
Sites: 25/100 | e-val: 0.000002
Factore-val(match)DB
RUNX10.0000012005JASPAR
RREB10.00091147JASPAR
HNF1A0.0040796JASPAR
Pax40.0050363JASPAR
Pou5f10.0063651JASPAR

BED file downloads

Download top of 238 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 8180465-8180615EEF1E158.63
chr8: 128957785-128957935RNU4-25P59.43
chr22: 46460880-46461030FLJ2736559.47
chrX: 107365960-107366110VSIG159.72
chr4: 150927440-150927590DCLK263.74
chr4: 120518660-120518810RP11-33B1.168.56
chr4: 120518660-120518810PDE5A68.56
chr3: 138069020-138069170MRAS70.38
chr9: 111735040-111735190IKBKAP70.68
chr11: 12505900-12506050PARVA72.18
View top connections.

Other

CodePlot