SOM cluster: 2105

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1965
Promoter: 2%
CpG-Island: 0%
Conserved: 21%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 1.8e-19
Factore-val(match)DB
Foxq10.00023963JASPAR
Foxd30.00028684JASPAR
HNF1A0.0039402JASPAR
Foxa20.0096222JASPAR
Pou5f10.010364JASPAR
Sites: 23/100 | e-val: 0.0011
Factore-val(match)DB
AP10.0000010559JASPAR
NFE2L20.00014485JASPAR
Arnt0.0096683JASPAR
NFE2L1::MafG0.017267JASPAR
Pax60.048848JASPAR

BED file downloads

Download top of 1965 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 65418580-65418730CTD-2016O11.136.49
chr5: 65418580-65418730RP11-305P14.136.49
chr10: 91351000-91351150RP11-80H5.237.32
chr10: 91351000-91351150SLC16A1237.32
chr8: 77280980-77281130LINC0111138
chr11: 44266300-44266450EXT240.88
chr7: 137567620-137567770CREB3L242.29
chr3: 141040100-141040250ZBTB3846.51
chr3: 141040100-141040250RP11-438D8.246.51
chr3: 168762600-168762750MECOM47.98
View top connections.

Other

CodePlot