SOM cluster: 2104

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4622
Promoter: 1%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.00042
Factore-val(match)DB
HNF1B0.000015562JASPAR
Foxq10.0010457JASPAR
Foxd30.0022722JASPAR
MEF2A0.0029571JASPAR
HNF1A0.0030015JASPAR

BED file downloads

Download top of 4622 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150536420-150536570MCL113.02
chr1: 150481225-150481375LINC0056816.99
chr12: 2248085-2248235CACNA1C35.01
chrX: 150094740-150094890CD99L237.52
chr9: 132919460-132919610NCS137.98
chr1: 171633120-171633270PRRC2C39.66
chr9: 103156705-103156855INVS39.73
chr20: 31069065-31069215ASXL139.9
chr9: 116362785-116362935RGS342.8
chr17: 35836165-35836315TADA2A43.21
View top connections.

Other

CodePlot