SOM cluster: 207

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 175
Promoter: 2%
CpG-Island: 0%
Conserved: 74%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 84/100 | e-val: 0
Factore-val(match)DB
REST0JASPAR
TLX1::NFIC0.00078062JASPAR
SOX90.009316JASPAR
RXR::RAR_DR50.0093665JASPAR
Sox20.015999JASPAR

BED file downloads

Download top of 175 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 74968180-74968330C1orf17332.53
chr7: 131430500-131430650AC093106.440.87
chr16: 13130600-13130750SHISA949.07
chr12: 33072160-33072310PKP252.57
chr12: 101220220-101220370ANO454.07
chr3: 182982980-182983130B3GNT559.44
chr6: 30346225-30346375HLA-L67.92
chr6: 30346225-30346375TRIM39-RPP2167.92
chr6: 30346225-30346375RPP2167.92
chr1: 119471700-119471850RP4-712E4.268.58
View top connections.

Other

CodePlot