SOM cluster: 203

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 270
Promoter: 20%
CpG-Island: 36%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.00000000000014821JASPAR
Pax40.0000017888JASPAR
Tal1::Gata10.00020216JASPAR
RREB10.00029219JASPAR
MZF1_1-40.0018667JASPAR
Sites: 53/100 | e-val: 0.0000000000000016
Factore-val(match)DB
SP10.00000000000015532JASPAR
Klf40.0000073085JASPAR
MZF1_1-40.00020847JASPAR
Pax40.0010994JASPAR
PPARG::RXRA0.0023385JASPAR

BED file downloads

Download top of 270 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 204047420-204047570SOX1336.04
chr1: 204047420-204047570ETNK236.04
chr8: 10592020-10592170PINX139.87
chr11: 134346445-134346595B3GAT144.19
chr12: 111374860-111375010RP1-46F2.246.53
chr4: 94749505-94749655GRID260.35
chr1: 201655920-201656070RP11-25B7.171.35
chr1: 16553405-16553555FBXO4271.53
chrX: 40028680-40028830BCOR71.94
chr19: 18704765-18704915UBA5273.37
View top connections.

Other

CodePlot