SOM cluster: 2023

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 202
Promoter: 5%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000000000000014
Factore-val(match)DB
AP10.00000000077248JASPAR
NFE2L20.0000000020033JASPAR
NFE2L1::MafG0.00008549JASPAR
PBX10.0085948JASPAR
Pax20.012814JASPAR
Sites: 30/100 | e-val: 0.052
Factore-val(match)DB
FEV0.00000025548JASPAR
NFATC20.00061567JASPAR
SPI10.00072031JASPAR
Foxq10.00093567JASPAR
ELK40.0010994JASPAR

BED file downloads

Download top of 202 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 25846980-25847130RP11-443N24.237.46
chr4: 86890680-86890830ARHGAP2443.88
chr11: 87784660-87784810RP11-164N3.344.39
chr15: 96872900-96873050NR2F2-AS151.98
chr15: 96872900-96873050RP11-522B15.351.98
chr15: 96872900-96873050RP11-522B15.451.98
chr15: 96872900-96873050NR2F251.98
chrX: 135296980-135297130MAP7D354.15
chr9: 117566805-117566955TNFSF1554.19
chr17: 1988205-1988355HIC157.89
View top connections.

Other

CodePlot