SOM cluster: 2020

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 11466
Promoter: 1%
CpG-Island: 0%
Conserved: 16%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 36/100 | e-val: 0.00000000000042
Factore-val(match)DB
Foxd30.000054928JASPAR
MEF2A0.0004907JASPAR
Foxq10.0034393JASPAR
Lhx30.01762JASPAR
Pax40.02287JASPAR
Sites: 14/100 | e-val: 1.8
Factore-val(match)DB
FOXD10.00018447JASPAR
FOXO30.00021908JASPAR
Foxa20.0012596JASPAR
FOXA10.0017619JASPAR
Foxd30.0020403JASPAR

BED file downloads

Download top of 11466 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92637780-92637930RP4-775D17.15.38
chr1: 147778965-147779115RP11-495P10.520.88
chr1: 151383265-151383415PSMB429.05
chrX: 152818725-152818875RP11-66N11.632.44
chr5: 115699005-115699155COMMD1036.19
chr1: 147768485-147768635RP11-495P10.736.85
chr7: 107364005-107364155SLC26A437.31
chr7: 150200180-150200330GIMAP739.35
chr10: 27230545-27230695ANKRD2639.72
chr1: 147729620-147729770RP11-301M17.141.78
View top connections.

Other

CodePlot