SOM cluster: 201

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 120
Promoter: 27%
CpG-Island: 80%
Conserved: 61%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.00011325JASPAR
TFAP2A0.0014299JASPAR
Egr10.0048093JASPAR
Zfx0.034554JASPAR
CTCF0.036486JASPAR
Sites: 83/100 | e-val: 5.8e-19
Factore-val(match)DB
TFAP2A0.00022305JASPAR
SP10.0097152JASPAR
Klf40.030152JASPAR
NHLH10.042691JASPAR
PLAG10.072702JASPAR

BED file downloads

Download top of 120 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 28198980-28199130THEMIS259.69
chr1: 45251960-45252110RPS859.89
chr1: 45251960-45252110KIF2C59.89
chr1: 45251960-45252110TCTEX1D459.89
chr1: 45251960-45252110PTCH259.89
chr1: 45251960-45252110SNORD38A59.89
chr3: 196366520-196366670NRROS59.91
chr3: 196366520-196366670WDR5359.91
chr3: 196366520-196366670LINC0106359.91
chr7: 100273620-100273770GNB260.23
View top connections.

Other

CodePlot