SOM cluster: 2007

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1060
Promoter: 0%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 2.5e-16
Factore-val(match)DB
Foxd30.0000037643JASPAR
Foxq10.0004454JASPAR
Lhx30.0062958JASPAR
Foxa20.0080676JASPAR
NFIL30.0084584JASPAR

BED file downloads

Download top of 1060 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 23615600-23615750RP11-371A19.220.41
chr9: 106853640-106853790SMC250.15
chr12: 24653400-24653550RP11-444D3.151.94
chr3: 155104920-155105070PABPC1P1052.87
chr2: 55825300-55825450PNPT153.4
chr12: 114832260-114832410TBX556.24
chrX: 144898820-144898970SLITRK262.07
chr2: 26052240-26052390TPM3P764.69
chr2: 167396400-167396550SCN7A75.2
chr15: 101585445-101585595RP11-424I19.176.06
View top connections.

Other

CodePlot