SOM cluster: 1985

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 362
Promoter: 1%
CpG-Island: 0%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000000000074
Factore-val(match)DB
MEF2A0.00011081JASPAR
Foxq10.00021277JASPAR
HNF1B0.00067251JASPAR
Foxd30.00072522JASPAR
NKX3-10.002288JASPAR

BED file downloads

Download top of 362 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147728880-147729030RP11-495P10.725.74
chr12: 20495140-20495290PDE3A33.65
chr7: 106320180-106320330RP5-884M6.143.3
chr7: 106320180-106320330CTB-111H14.143.3
chr4: 189183780-189183930RP11-219G10.149.13
chr11: 27725245-27725395RP11-587D21.449.16
chr11: 27725245-27725395BDNF49.16
chr8: 19577100-19577250CSGALNACT152.58
chr15: 101837300-101837450VIMP55.88
chr16: 4425860-4426010GLIS258.25
View top connections.

Other

CodePlot