SOM cluster: 1974

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3912
Promoter: 3%
CpG-Island: 0%
Conserved: 15%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.00000014
Factore-val(match)DB
Lhx30.000015295JASPAR
ARID3A0.00018314JASPAR
Pax40.00031515JASPAR
MEF2A0.0037818JASPAR
Foxd30.0051051JASPAR

BED file downloads

Download top of 3912 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 136526620-136526770RP11-343P9.135.87
chr8: 99615105-99615255STK343.66
chr3: 127404660-127404810ABTB146.11
chr6: 29893640-29893790MICD48.72
chr9: 131101580-131101730SLC27A449.61
chr19: 55017425-55017575LAIR252.55
chr17: 2501080-2501230snoU1353.99
chr17: 2501080-2501230PAFAH1B153.99
chrX: 102893520-102893670TMEM3154.11
chr9: 21516880-21517030MIR3155.8
View top connections.

Other

CodePlot