SOM cluster: 1967

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3468
Promoter: 0%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0.00000074
Factore-val(match)DB
Lhx30.00088246JASPAR
Prrx20.002249JASPAR
MEF2A0.0041959JASPAR
ARID3A0.011215JASPAR
HNF1A0.011425JASPAR

BED file downloads

Download top of 3468 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 95287260-95287410GEM35.09
chr12: 106702020-106702170RP11-651L5.238.87
chr1: 147151000-147151150ACP640.5
chr8: 35594720-35594870UNC5D44.59
chr1: 2995580-2995730AL008733.165.56
chr1: 2995580-2995730LINC0098265.56
chr1: 171774940-171775090VAMP467.27
chr3: 150353580-150353730RP11-103G8.270.1
chr6: 159184520-159184670EZR71.36
chr3: 45835060-45835210SLC6A2071.88
View top connections.

Other

CodePlot