SOM cluster: 1953

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 10699
Promoter: 0%
CpG-Island: 0%
Conserved: 15%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 24/100 | e-val: 0.00000000000028
Factore-val(match)DB
MEF2A0.000034503JASPAR
Foxd30.00028269JASPAR
Sox20.00030014JASPAR
Foxq10.00057365JASPAR
Pou5f10.00082354JASPAR

BED file downloads

Download top of 10699 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 65955280-65955430RP11-430H12.243.34
chr8: 57424220-57424370SEPT10P144.99
chr1: 60109400-60109550FGGY45.5
chr1: 78935360-78935510PTGFR45.88
chr3: 32132960-32133110snoU1346.27
chr1: 78214320-78214470USP3348.67
chr1: 202884480-202884630RP11-480I12.548.78
chr2: 119985040-119985190C1QL249.6
chr2: 119985040-119985190STEAP349.6
chr9: 110140445-110140595RAD23B50.3
View top connections.

Other

CodePlot