SOM cluster: 1913

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3633
Promoter: 1%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 4.5e-34
Factore-val(match)DB
Foxd30.00015222JASPAR
Foxq10.0024097JASPAR
MEF2A0.0062351JASPAR
FOXI10.0065124JASPAR
Foxa20.009292JASPAR
Sites: 58/100 | e-val: 2.7e-27
Factore-val(match)DB
SOX100.00028308JASPAR
SOX90.00089179JASPAR
Sox170.024003JASPAR
Sox50.042279JASPAR
Sox20.086785JASPAR

BED file downloads

Download top of 3633 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 132179025-132179175RP11-495K9.531.96
chr3: 25579100-25579250RARB35.75
chr13: 99372205-99372355CALM2P440.53
chr4: 143233265-143233415LSM3P441.29
chr13: 99172205-99172355FARP1-AS142.39
chr1: 211002460-211002610KCNH149.73
chr17: 5328485-5328635NUP8850.02
chr1: 210157345-210157495SYT1450.09
chr17: 66285445-66285595SLC16A650.86
chr17: 66285445-66285595ARSG50.86
View top connections.

Other

CodePlot