SOM cluster: 1913
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 3633Promoter: 1%
CpG-Island: 0%
Conserved: 40%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 53/100 | e-val: 4.5e-34 | ||
---|---|---|
Factor | e-val(match) | DB |
Foxd3 | 0.00015222 | JASPAR |
Foxq1 | 0.0024097 | JASPAR |
MEF2A | 0.0062351 | JASPAR |
FOXI1 | 0.0065124 | JASPAR |
Foxa2 | 0.009292 | JASPAR |
Sites: 58/100 | e-val: 2.7e-27 | ||
Factor | e-val(match) | DB |
SOX10 | 0.00028308 | JASPAR |
SOX9 | 0.00089179 | JASPAR |
Sox17 | 0.024003 | JASPAR |
Sox5 | 0.042279 | JASPAR |
Sox2 | 0.086785 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr12: 132179025-132179175 | RP11-495K9.5 | 31.96 |
chr3: 25579100-25579250 | RARB | 35.75 |
chr13: 99372205-99372355 | CALM2P4 | 40.53 |
chr4: 143233265-143233415 | LSM3P4 | 41.29 |
chr13: 99172205-99172355 | FARP1-AS1 | 42.39 |
chr1: 211002460-211002610 | KCNH1 | 49.73 |
chr17: 5328485-5328635 | NUP88 | 50.02 |
chr1: 210157345-210157495 | SYT14 | 50.09 |
chr17: 66285445-66285595 | ARSG | 50.86 |
chr17: 66285445-66285595 | SLC16A6 | 50.86 |