SOM cluster: 1910

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 251
Promoter: 4%
CpG-Island: 0%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 3.6e-21
Factore-val(match)DB
SOX100.000021997JASPAR
Sox20.000045403JASPAR
Pou5f10.00021396JASPAR
SRY0.0080558JASPAR
SOX90.00818JASPAR

BED file downloads

Download top of 251 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147039480-147039630BCL916.73
chr7: 42232900-42233050GLI337.39
chr1: 167105785-167105935RP11-277B15.156.16
chr1: 167105785-167105935POU2F156.16
chr5: 146168620-146168770PPP2R2B62.07
chr6: 29629640-29629790GABBR162.54
chr6: 10396260-10396410LINC0051863.3
chr3: 193428600-193428750OPA1-AS164.82
chr11: 46998800-46998950LRP466.35
chr1: 157083500-157083650ETV372.89
View top connections.

Other

CodePlot