SOM cluster: 1906

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 14468
Promoter: 0%
CpG-Island: 0%
Conserved: 18%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0.00000000007
Factore-val(match)DB
MEF2A0.0003266JASPAR
Lhx30.0020982JASPAR
ARID3A0.004056JASPAR
Foxd30.0047638JASPAR
HNF1B0.0052142JASPAR

BED file downloads

Download top of 14468 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146603660-146603810RP11-337C18.713
chr2: 122468500-122468650RPL12P1526.59
chr5: 119843160-119843310PRR1632.03
chr7: 43028740-43028890PSMA236.02
chr11: 102842280-102842430RP11-690D19.136.32
chr1: 202485840-202485990RP11-175B9.236.32
chr9: 110069700-110069850RAD23B37.18
chr8: 123765180-123765330snoU1337.32
chr3: 170159960-170160110SLC7A1437.41
chr18: 66493645-66493795CCDC102B37.55
View top connections.

Other

CodePlot