SOM cluster: 187

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 47
Promoter: 21%
CpG-Island: 2%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/47 | e-val: 0.000000005
Factore-val(match)DB
NFE2L20.00000000000051825JASPAR
AP10.0000000076367JASPAR
PPARG0.003705JASPAR
Pax20.0076781JASPAR
ESR10.011173JASPAR
Sites: 30/47 | e-val: 0.000045
Factore-val(match)DB
SP10.0000044426JASPAR
Klf40.000019875JASPAR
RREB10.00016189JASPAR
Pax40.00093197JASPAR
Tcfcp2l10.005546JASPAR
Sites: 27/47 | e-val: 0.0036
Factore-val(match)DB
FEV0.000000000075319JASPAR
SPI10.0000000003584JASPAR
GABPA0.0000000024227JASPAR
ELF50.00000033176JASPAR
ELK40.000001934JASPAR

BED file downloads

Download top of 47 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 65849100-65849250GAL3ST338.05
chr9: 139434220-139434370NOTCH138.08
chr19: 16181205-16181355HSH2D50.72
chr2: 64870480-64870630AFTPH74.21
chr2: 64870480-64870630SERTAD274.21
chr9: 129568140-129568290ZBTB4377.77
chr3: 172241180-172241330TNFSF1083.53
chr8: 27219740-27219890PTK2B88.74
chr17: 76732920-76733070CYTH193.56
chr17: 76732920-76733070USP3693.56
View top connections.

Other

CodePlot