SOM cluster: 183

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 221
Promoter: 38%
CpG-Island: 98%
Conserved: 74%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00093877JASPAR
Zfx0.0038759JASPAR
SP10.0096108JASPAR
Egr10.010492JASPAR
NHLH10.035459JASPAR
Sites: 93/100 | e-val: 6.7e-32
Factore-val(match)DB
TFAP2A0.000016732JASPAR
SP10.00031506JASPAR
PLAG10.0014749JASPAR
Zfx0.011206JASPAR
NHLH10.013625JASPAR

BED file downloads

Download top of 221 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 62962020-62962170GNA1334.72
chr1: 171711380-171711530MYOC44.8
chr1: 171711380-171711530DNM344.8
chr1: 171711380-171711530RP4-560B9.444.8
chr1: 171711380-171711530METTL1344.8
chr1: 762980-763130LINC0112845.51
chr1: 202858045-202858195RP11-38O14.549.24
chr9: 33167605-33167755SMU151.45
chr9: 33167605-33167755RP11-326F20.551.45
chr9: 33167605-33167755RNU4ATAC15P51.45
View top connections.

Other

CodePlot