SOM cluster: 1816

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 6150
Promoter: 0%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0.0000000027
Factore-val(match)DB
MEF2A0.000043229JASPAR
Lhx30.000067654JASPAR
HNF1B0.0053719JASPAR
Pax40.0071179JASPAR
ARID3A0.0073404JASPAR
Sites: 33/100 | e-val: 0.032
Factore-val(match)DB
ARID3A0.0018237JASPAR
HNF1A0.0020833JASPAR
Lhx30.0037134JASPAR
FOXO30.0079368JASPAR
Nkx2-50.019671JASPAR

BED file downloads

Download top of 6150 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 32011000-32011150ZNF86033.95
chr3: 168230660-168230810EGFEM1P34.09
chr7: 130832440-130832590MKLN135.58
chr1: 66756520-66756670PDE4B40.98
chr3: 31890540-31890690OSBPL1041.65
chr7: 128899320-128899470AHCYL243.97
chr11: 17008400-17008550PLEKHA746.97
chrX: 69638180-69638330RNU4-81P47.73
chr3: 16412365-16412515RFTN148.96
chr1: 147148140-147148290ACP649.69
View top connections.

Other

CodePlot